Review




Structured Review

SourceForge net bbduk bbmap version 38.90-3
Bbduk Bbmap Version 38.90 3, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbmap+package+bbduk/pmc11388366__pnas__2402913121__sapp-159-8-12
Average 90 stars, based on 1 article reviews
bbduk bbmap version 38.90-3 - by Bioz Stars, 2026-09
90/100 stars

Images

Related Articles

other:

Article Title: Structural and functional characterization of a porcine intestinal microbial ecosystem developed in vitro.
Article Snippet: Raw shotgun metagenomic sequencing reads were preprocessed for adapter removal and quality trimming and filtering using BBDuk v38.7 (https://sourceforge.net/projects/bbmap/) with the parameters (k = 31, hdist = 1, ftm = 5, qtrim = r, trimq = 10.)

Article Title: Deficits in mitochondrial dynamics and iron balance result in templated insertions.
Article Snippet: In brief, first, PhiX reads were removed from paired-end raw sequencing reads with BBDuk v38.46 (https://sourceforge.net/projects/bbmap/) using default parameters.

Article Title: TFEB and TFE3 control glucose homeostasis by regulating insulin gene expression
Article Snippet: For RNA-seq analysis, library preparation was performed with a total of 100 ng of RNA from each sample using QuantSeq 30mRNA-Seq Library prep kit (Lexogen) according to manufacturer’s instructions.

Article Title: Supporting Information for Deficiency of IL-22–binding protein enhances the ability of the gut microbiota to protect against enteric pathogens
Article Snippet: Amplicon sequences were oriented, trimmed of adaptor and primer sequences and paired using the bbtools (37.02) software package (https://sourceforge.net/projects/bbmap/; ‘bbduk.sh’ and ‘repair.sh’ tools).

Article Title: Distribution patterns of N6-methyladenine in the rye genome
Article Snippet: Reads preprocessing was executed using BBTools (BBMap and BBDuk, version 38.96, available at https://sourceforge.net/projects/bbmap/ ), following the Reads QC Workflow.

Article Title: Deficits in mitochondrial dynamics and iron balance result in templated insertions
Article Snippet: In brief, first, PhiX reads were removed from paired-end raw sequencing reads with BBDuk v38.46 ( https://sourceforge.net/projects/bbmap/ ) using default parameters.

Article Title: Supporting Information for Type I interferon signaling pathway enhances immune-checkpoint inhibition in KRAS mutant lung tumors
Article Snippet: Subsequently, polyA tails and adapters were removed using BBDuk (BBMap version 38.90-3) (https://sourceforge.net/projects/bbmap/).

Sequencing:

Article Title: Synchronized seasonal excretion of multiple coronaviruses coincides with high rates of coinfection in immature bats
Article Snippet: Next, the purified DNA was sequenced on the Illumina iSeq 100 platform using the Nextera XT DNA library preparation kit with unique dual indexes generating at least 100,000 paired reads per sample (2 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\times$$\end{document} × 150nt). .. For data analysis, sequence reads were trimmed of adapter and low-quality bases using BBDuk (available from https://sourceforge.net/projects/bbmap/ ) before de novo assembly with MEGAHIT . ..



Similar Products

86
Sentieon Inc bbmap bbduk
Bbmap Bbduk, supplied by Sentieon Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbduk+bbmap/pm42286338-556-5-28
Average 86 stars, based on 1 article reviews
bbmap bbduk - by Bioz Stars, 2026-09
86/100 stars
  Buy from Supplier

90
SourceForge net bbduk bbmap version 38.90-3
Bbduk Bbmap Version 38.90 3, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbmap+package+bbduk/pmc11388366__pnas__2402913121__sapp-159-8-12
Average 90 stars, based on 1 article reviews
bbduk bbmap version 38.90-3 - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
SourceForge net bbduk bbmap v.38.26
Bbduk Bbmap V.38.26, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbmap+package+bbduk/pm40503797-11-5-8
Average 90 stars, based on 1 article reviews
bbduk bbmap v.38.26 - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
SourceForge net bbduk bbmap version 39.06
Bbduk Bbmap Version 39.06, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbmap+package+bbduk/bio_rxiv__2025__05__12__653540-237-5-10
Average 90 stars, based on 1 article reviews
bbduk bbmap version 39.06 - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
SourceForge net bbduk of bbmap
Bbduk Of Bbmap, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbmap+package+bbduk/pmc11797022-122-14-15
Average 90 stars, based on 1 article reviews
bbduk of bbmap - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
Lexogen GmbH bbduk bbmap version 37.87
Bbduk Bbmap Version 37.87, supplied by Lexogen GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbduk/pm39433949-342-5-15
Average 90 stars, based on 1 article reviews
bbduk bbmap version 37.87 - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
SourceForge net bbduk from the bbmap package
Bbduk From The Bbmap Package, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbmap+package+bbduk/pm38701107-291-23-28
Average 90 stars, based on 1 article reviews
bbduk from the bbmap package - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
SourceForge net bbtools bbmap bbduk
Bbtools Bbmap Bbduk, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbtools+bbmap/bio_rxiv__2023__11__29__568526-75-5-13
Average 90 stars, based on 1 article reviews
bbtools bbmap bbduk - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

90
Illumina Inc bbduk from bbmap v38.68
Bbduk From Bbmap V38.68, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bbmap+bbduk/bbduk+from+bbmap+v38+68/pm37592350-35-25-0
Average 90 stars, based on 1 article reviews
bbduk from bbmap v38.68 - by Bioz Stars, 2026-09
90/100 stars
  Buy from Supplier

Image Search Results